Photoaffinity probes were designed to target cyclin‐dependent kinases (CDKs), which can be regarded as the timekeepers of cellular processes. As reported by J. T. Bush and co‐workers in their Research Article (DOI: https://doi.org/10.1002/anie.20190632110.1002/anie.201906321), these probes competitively enrich CDKs from cell lysates, and a biochemical photoaffinity displacement assay was developed to measure compound potency. The seesaw represents the balance of competition between the photoaffinity probe and competitor compound.
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A Photoaffinity Displacement Assay and Probes to Study the Cyclin‐Dependent Kinase Family
[ASAP] Light-Induced Protein Degradation with Photocaged PROTACs
A Photoaffinity Displacement Assay and Probes to Study the Cyclin‐Dependent Kinase Family
Selectivity snapshots with PALs: Photoaffinity probes were designed to target the cyclin‐dependent kinase family, and found to competitively enrich CDKs from cell lysates. Subsequently, a biochemical photoaffinity displacement assay was developed to measure compound potency.
Abstract
The CDK family plays a crucial role in the control of the cell cycle. Dysregulation and mutation of the CDKs has been implicated in cancer and the CDKs have been investigated extensively as potential therapeutic targets. Selective inhibition of specific isoforms of the CDKs is crucial to achieve therapeutic effect while minimising toxicity. We present a group of photoaffinity probes designed to bind to the family of CDKs. The site of crosslinking of the optimised probe, as well as its ability to enrich members of the CDK family from cell lysates, was investigated. In a proof of concept study, we subsequently developed a photoaffinity probe‐based competition assay to profile CDK inhibitors. We anticipate that this approach will be widely applicable to the study of small molecule binding to protein families of interest.
[ASAP] Profile of a Highly Selective Quaternized Pyrrolidine Betaine avß6 Integrin Inhibitor—(3S)-3-(3-(3,5-Dimethyl-1H-pyrazol-1-yl)phenyl)-4-((1S and 1R,3R)-1-methyl-3-(2-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)ethyl)pyrrolidin-1-ium-1-yl)butanoate Synthesized by Stereoselective Methylation
SO2F2‐Activated Efficient Beckmann Rearrangement of Ketoximes for Accessing Amides and Lactams
A novel protocol for the efficient activation of the Beckmann rearrangement utilizing the readily available sulfuryl fluoride (SO2F2 gas) is reported. The substrate scope of this methodology has been demonstrated by 37 examples with good to nearly quantitative isolated yields in a short time. A tentative mechanism was proposed involving formation and elimination of sulfonyl ester.
A novel, mild and practical protocol for the efficient activation of the Beckmann rearrangement utilizing the readily available and economical sulfuryl fluoride (SO2F2 gas) has been developed. The substrate scope of the operationally simple methodology has been demonstrated by 37 examples with good to nearly quantitative isolated yields (over 90 % yield in most cases) in a short time, including B(OH)2, COOH, NH2, and OH substituted substrates. A tentative mechanism was proposed involving formation and elimination of key intermediate, sulfonyl ester.
[ASAP] Expanding Reactivity in DNA-Encoded Library Synthesis via Reversible Binding of DNA to an Inert Quaternary Ammonium Support
De novo macrocyclic peptides that specifically modulate Lys48-linked ubiquitin chains
Nature Chemistry, Published online: 10 June 2019; doi:10.1038/s41557-019-0278-x
Modulating particular ubiquitin chains using binding molecules is challenging given the diversity of chain lengths and linkages found in vivo. Now, tight binding modulators that are specific to K48-linked ubiquitin chains have been found by combining protein synthesis and screening of macrocyclic peptide ligands.[ASAP] Genetically Encoding Photocaged Quinone Methide to Multitarget Protein Residues Covalently in Vivo
[ASAP] Rapid Covalent-Probe Discovery by Electrophile-Fragment Screening
Concerted Nucleophilic Aromatic Substitution Reactions
Recent developments in experimental and computational chemistry have identified a rapidly growing class of nucleophilic aromatic substitutions that proceed by concerted (cSNAr),1,2 rather than classical two‐step, SNAr mechanisms. Whereas traditional SNAr reactions require substantial activation of the aromatic ring by electron‐withdrawing substituents, such activating groups are not mandatory in the concerted pathways. At this crucial stage of growth in understanding of these reactions, our aim is to review the current state of knowledge on CSNAr reactions. [The review includes many types of substrates and nucleophiles; it specifically excludes transition metal‐related processes that might involve concerted substitutions on arenes].
[ASAP] Copper-Catalyzed Trifluoromethylation of Alkyl Bromides
[ASAP] Diazo-Transfer Reagent 2-Azido-4,6-dimethoxy-1,3,5-triazine Displays Highly Exothermic Decomposition Comparable to Tosyl Azide
Concerted Nucleophilic Aromatic Substitution Reactions
Concerted or stepwise? A class of nucleophilic aromatic substitutions has been developed that proceed by concerted (cSNAr) rather than classical, two‐step, SNAr mechanisms. Whereas traditional SNAr reactions require substantial activation of the aromatic ring by electron‐withdrawing substituents, such activating groups are not mandatory in the concerted pathways.
Abstract
Recent developments in experimental and computational chemistry have identified a rapidly growing class of nucleophilic aromatic substitutions that proceed by concerted (cSNAr) rather than classical, two‐step, SNAr mechanisms. Whereas traditional SNAr reactions require substantial activation of the aromatic ring by electron‐withdrawing substituents, such activating groups are not mandatory in the concerted pathways.
[ASAP] Electrochemically Driven, Ni-Catalyzed Aryl Amination: Scope, Mechanism, and Applications
[ASAP] Tandem Acyl Substitution/Michael Addition of Thioesters with Vinylmagnesium Bromide
[ASAP] Targeting the MKK7–JNK (Mitogen-Activated Protein Kinase Kinase 7–c-Jun N-Terminal Kinase) Pathway with Covalent Inhibitors
[ASAP] The Alkyne Moiety as a Latent Electrophile in Irreversible Covalent Small Molecule Inhibitors of Cathepsin K
PROTACs suppression of CDK4/6, crucial kinases for cell cycle regulation in cancer
DOI: 10.1039/C9CC00163H, Communication
PROTACs based on two selective, FDA approved, CDK4/6 inhibitors were formed. These PROTACs at nanomolar concentrations deplete CDK4/6.
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[ASAP] Cannabinoids from Cannabis sativa L.: A New Tool Based on HPLC–DAD–MS/MS for a Rational Use in Medicinal Chemistry
[ASAP] Fragment-Based Covalent Ligand Screening Enables Rapid Discovery of Inhibitors for the RBR E3 Ubiquitin Ligase HOIP
Photoredox‐Catalyzed Cyclobutane Synthesis by a Deboronative Radical Addition–Polar Cyclization Cascade
Arylboronate complexes formed from alkylboronic esters and phenyllithium were found to undergo facile single‐electron oxidation to form alkyl radicals. The novel use of these complexes as radical precursors enabled the development of a photoredox‐catalyzed cyclobutane synthesis proceeding through a radical‐polar crossover mechanism.
Abstract
Photoredox‐catalyzed methylcyclobutanations of alkylboronic esters are described. The reactions proceed through single‐electron transfer induced deboronative radical addition to an electron‐deficient alkene followed by single‐electron reduction and polar 4‐exo‐tet cyclization with a pendant alkyl halide. Key to the success of the methodology was the use of easily oxidizable arylboronate complexes. Structurally diverse cyclobutanes are shown to be conveniently prepared from readily available alkylboronic esters and a range of haloalkyl alkenes. The mild reactions display excellent functional group tolerance, and the radical addition‐polar cyclization cascade also enables the synthesis of 3‐, 5‐, 6‐, and 7‐membered rings.
[ASAP] Emerging and Re-Emerging Warheads for Targeted Covalent Inhibitors: Applications in Medicinal Chemistry and Chemical Biology
[ASAP] Transition-Metal-Free Desulfinative Cross-Coupling of Heteroaryl Sulfinates with Grignard Reagents
Copper‐Catalyzed Enantioselective Construction of Tertiary Propargylic Sulfones
Copper to the rescue: A general method for the synthesis of propargylic sulfones featuring quaternary stereocenters has been developed. The method relies on a copper‐catalyzed sulfonylation of propargylic cyclic carbonates using sodium sulfinates. It provides the first example of such a transition‐metal‐catalyzed enantioselective propargylic substitution reaction with sulfur‐centered nucleophiles and gives access to functionalized tertiary sulfones.
Abstract
Tertiary propargylic sulfones are of significant importance in organic synthesis and medicinal chemistry, but to date no general asymmetric synthesis approach has been developed. We disclose a versatile copper‐catalyzed sulfonylation of propargylic cyclic carbonates using sodium sulfinates that allows the construction of propargylic sulfones featuring elusive quaternary stereocenters. This method provides the first successful example of such an enantioselective propargylic sulfonylation, features high asymmetric induction, wide functional group tolerance, and scalability, and enables attractive product diversification.
[ASAP] NHC-Catalyzed Deamination of Primary Sulfonamides: A Platform for Late-Stage Functionalization
[ASAP] Discovery of a Novel Inhaled PI3Kd Inhibitor for the Treatment of Respiratory Diseases
[ASAP] Direct C–C Bond Formation from Alkanes Using Ni-Photoredox Catalysis
[ASAP] Alkyl Sulfinates: Radical Precursors Enabling Drug DiscoveryMiniperspective
[ASAP] Photoactivation of MDM2 Inhibitors: Controlling Protein–Protein Interaction with Light
SNAr stands corrected
SNAr stands corrected
S<sub>N</sub>Ar stands corrected, Published online: 20 September 2018; doi:10.1038/s41557-018-0138-0
Dynamic covalent chemistry combines the error-correcting behaviour of supramolecular chemistry with the robustness of covalent bonding, but relies on a somewhat limited set of reactions. Now, the classic nucleophilic aromatic substitution (SNAr) reaction has been shown to be reversible and self-correcting.