Shared posts

30 Nov 15:12

Antimicrobial Peptide Lactoferricin B-Induced Rapid Leakage of Internal Contents from Single Giant Unilamellar Vesicles

by Md. Moniruzzaman, Jahangir Md. Alam, Hideo Dohra and Masahito Yamazaki

TOC Graphic

Biochemistry
DOI: 10.1021/acs.biochem.5b00594
06 Nov 20:33

[In Depth] Microbes aid cancer drugs

by Mitch Leslie
A new class of cancer treatments that unleash the power of the immune system on tumors may depend on some unlikely allies. Two studies of mice in this week's issue of Science demonstrate that the gut microbiome—the swarms of microorganisms dwelling in the intestines—determines how effective these cancer immunotherapies are. Known as checkpoint inhibitors, the therapies foil one of cancer's most devious survival tricks: its ability to turn off the immune response that might otherwise attack tumor cells. In one case, researchers found that a checkpoint inhibitor targeting CTLA4, a molecule on T cells, works best in mice if their guts contain bacteria in the Bacteroides and Burkholderia genera. In the other, a drug targeting PD-L1 showed a similar dependency on members of the genus Bifidobacterium. Author: Mitch Leslie
23 Oct 15:13

Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions

by Carmen Schwechheimer

Nature Reviews Microbiology 13, 605 (2015). doi:10.1038/nrmicro3525

Authors: Carmen Schwechheimer & Meta J. Kuehn

Outer-membrane vesicles (OMVs) are spherical buds of the outer membrane filled with periplasmic content and are commonly produced by Gram-negative bacteria. The production of OMVs allows bacteria to interact with their environment, and OMVs have been found to mediate diverse functions, including promoting pathogenesis, enabling

21 Oct 16:50

Peptide Targeting of an Antibiotic Prodrug toward Phagosome-Entrapped Mycobacteria

by Mark P. Pereira, Julie Shi and Shana O. Kelley

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00099
21 Oct 14:15

Expanding the scope of alkyne-mediated bioconjugations utilizing unnatural amino acids

Chem. Commun., 2015, Advance Article
DOI: 10.1039/C5CC08287K, Communication
Johnathan C. Maza, Zachary M. Nimmo, Douglas D. Young
The importance of bioconjugates within the field of chemistry drives the need for novel methodologies for their preparation.
To cite this article before page numbers are assigned, use the DOI form of citation above.
The content of this RSS Feed (c) The Royal Society of Chemistry
15 Oct 19:12

Investigational Agents for the Treatment of Gram-Negative Bacterial Infections: A Reality Check

by Karen Bush

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00100
05 Oct 21:02

Gene Expression Variability Underlies Adaptive Resistance in Phenotypically Heterogeneous Bacterial Populations

by Keesha E. Erickson, Peter B. Otoupal and Anushree Chatterjee

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00095
05 Oct 21:02

Permeability Barrier of Gram-Negative Cell Envelopes and Approaches To Bypass It

by Helen I. Zgurskaya, Cesar A. López and S. Gnanakaran

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00097
05 Oct 21:01

Bacterial Transcription Inhibitor of RNA Polymerase Holoenzyme Formation by Structure-Based Drug Design: From in Silico Screening to Validation

by Cong Ma, Xiao Yang and Peter J. Lewis

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00058
02 Oct 15:15

A RIAM/lamellipodin–talin–integrin complex forms the tip of sticky fingers that guide cell migration

by Frederic Lagarrigue

Article

The leading edge of migrating cells contains activated integrins associated with growing actin filaments that form ‘sticky fingers’ to guide cell migration. Here, the authors detect a complex of MRL proteins, talin and activated integrins in lamellipodia and filopodia in living cells, comprising the tips of the ‘sticky fingers’.

Nature Communications doi: 10.1038/ncomms9492

Authors: Frederic Lagarrigue, Praju Vikas Anekal, Ho-Sup Lee, Alexia I. Bachir, Jailal N. Ablack, Alan F. Horwitz, Mark H. Ginsberg

28 Sep 14:44

Epicatechin gallate, a naturally occurring polyphenol, alters the course of infection with β-lactam-resistant Staphylococcus aureus in the zebrafish embryo

Christina S. Stevens, Helena Rosado, Robert J. Harvey, Peter W. Taylor
24 Sep 16:39

Chemoenzymatic Assembly of Bacterial Glycoconjugates for Site-Specific Orthogonal Labeling

by Vinita Lukose, Garrett Whitworth, Ziqiang Guan and Barbara Imperiali

TOC Graphic

Journal of the American Chemical Society
DOI: 10.1021/jacs.5b07146
24 Sep 16:31

Cannabis

by Michelle Grayson
D.j. Forster

Interesting

Cannabis

Nature. doi:10.1038/525S1a

Author: Michelle Grayson

23 Sep 17:55

Sensing Protein Surfaces with Targeted Fluorescent Receptors

by Yael Nissinkorn, Naama Lahav-Mankovski, Aharon Rabinkov, Shira Albeck, Leila Motiei, David Margulies

Abstract

Invited for the cover of this issue is the group of David Margulies at the Weizmann Institute of Science (Israel). The image highlights the analogy between fluorescent molecular sensors and a miniaturized camera that can capture changes that occur at the nanoscale and shed light on the structural state of proteins. Read the full text of the article at 10.1002/chem.201502069.

Thumbnail image of graphical abstract

We believe that the concept of combining a highly specific and a non-specific protein binder on a single molecular platform could open up new possibilities for detecting proteins and/or regulating their functions.” Read more about the story behind the cover in the Cover Profile and about the research itself on page 15981 ff. (DOI: 10.1002/chem.201502069).

23 Sep 14:18

Phosphorylation of BlaR1 in Manifestation of Antibiotic Resistance in Methicillin-Resistant Staphylococcus aureus and Its Abrogation by Small Molecules

by Marc A. Boudreau, Jennifer Fishovitz, Leticia I. Llarrull, Qiaobin Xiao and Shahriar Mobashery

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00086
23 Sep 14:17

Antimicrobial Activity and Toxicity of the Major Lipopeptide Components of Polymyxin B and Colistin: Last-Line Antibiotics against Multidrug-Resistant Gram-Negative Bacteria

by Kade D. Roberts, Mohammad A. K. Azad, Jiping Wang, Andrew S. Horne, Philip E. Thompson, Roger L. Nation, Tony Velkov and Jian Li

TOC Graphic

ACS Infectious Diseases
DOI: 10.1021/acsinfecdis.5b00085
23 Sep 14:17

D-Enantiomeric Peptides that Eradicate Wild-Type and Multidrug-Resistant Biofilms and Protect against Lethal Infections

by César de la Fuente-Núñez, Fany Reffuveille, Sarah C. Mansour, Shauna L. Reckseidler-Zenteno, Diego Hernández, Gilles Brackman, Tom Coenye, Robert E.W. Hancock
(Chemistry & Biology 22, 196–205, February 19, 2015)
16 Sep 18:45

Through the wall: extracellular vesicles in Gram-positive bacteria, mycobacteria and fungi

by Lisa Brown

Nature Reviews Microbiology 13, 620 (2015). doi:10.1038/nrmicro3480

Authors: Lisa Brown, Julie M. Wolf, Rafael Prados-Rosales & Arturo Casadevall

Extracellular vesicles (EVs) are produced by all domains of life. In Gram-negative bacteria, EVs are produced by the pinching off of the outer membrane; however, how EVs escape the thick cell walls of Gram-positive bacteria, mycobacteria and fungi is still unknown. Nonetheless, EVs have been

14 Sep 14:08

Enzyme-Instructed Intracellular Molecular Self-Assembly to Boost Activity of Cisplatin against Drug-Resistant Ovarian Cancer Cells

by Jie Li, Yi Kuang, Junfeng Shi, Jie Zhou, Jamie E. Medina, Rong Zhou, Dan Yuan, Cuihong Yang, Huaimin Wang, Zhimou Yang, Jianfeng Liu, Daniela M. Dinulescu, Bing Xu

Abstract

Anticancer drug resistance demands innovative approaches that boost the activity of drugs against drug-resistant cancers without increasing the systemic toxicity. Here we show the use of enzyme-instructed self-assembly (EISA) to generate intracellular supramolecular assemblies that drastically boost the activity of cisplatin against drug-resistant ovarian cancer cells. We design and synthesize small peptide precursors as the substrates of carboxylesterase (CES). CES cleaves the ester bond pre-installed on the precursors to form the peptides that self-assemble in water to form nanofibers. At the optimal concentrations, the precursors themselves are innocuous to cells, but they double or triple the activity of cisplatin against the drug-resistant ovarian cancer cells. This work illustrates a simple, yet fundamental, new way to introduce non-cytotoxic components into combination therapies with cisplatin without increasing the systemic burden or side effects.

Thumbnail image of graphical abstract

Cisplatin-boosting nanofibers: The design and synthesis is reported of small peptide precursors that can be cleaved by carboxylesterase (CES) to form peptides that self-assemble in water to form molecular nanofibers. The precursors themselves are innocuous to cells at optimal concentrations, but they double or triple the activity of cisplatin against drug-resistant ovarian cancer cells.

11 Sep 17:51

Genetically Encoded Azide Containing Amino Acid in Mammalian Cells Enables Site-Specific Antibody–Drug Conjugates Using Click Cycloaddition Chemistry

by Michael P. VanBrunt, Kurt Shanebeck, Zachary Caldwell, Jeffrey Johnson, Pamela Thompson, Thomas Martin, Huifang Dong, Gary Li, Hengyu Xu, Francois D’Hooge, Luke Masterson, Pauline Bariola, Arnaud Tiberghien, Ebele Ezeadi, David G. Williams, John A. Hartley, Philip W. Howard, Kenneth H. Grabstein, Michael A. Bowen and Marcello Marelli

TOC Graphic

Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.5b00359
11 Sep 13:38

Bioorthogonal Enzymatic Activation of Caged Compounds

by Cornelia Ritter, Nathalie Nett, Carlos G. Acevedo-Rocha, Richard Lonsdale, Katja Kräling, Felix Dempwolff, Sabrina Hoebenreich, Peter L. Graumann, Manfred T. Reetz, Eric Meggers

Abstract

Engineered cytochrome P450 monooxygenase variants are reported as highly active and selective catalysts for the bioorthogonal uncaging of propargylic and benzylic ether protected substrates, including uncaging in living E. coli. observed selectivity is supported by induced-fit docking and molecular dynamics simulations. This proof-of-principle study points towards the utility of bioorthogonal enzyme/protecting group pairs for applications in the life sciences.

Thumbnail image of graphical abstract

The great escape: Engineered cytochrome P450 monooxygenases were used for the removal of propargylic and benzylic ether protecting groups in vitro and in living E. coli. Deprotection resulted in the release of uncaged alcohols, which in this case display fluorescence properties. Such bioorthogonal enzyme/protecting group pairs could provide a means for the selective release of imaging agents or the catalytic activation of prodrugs at their site of action.

11 Sep 13:34

MOF nanoparticles coated by lipid bilayers and their uptake by cancer cells

Chem. Commun., 2015, 51,15752-15755
DOI: 10.1039/C5CC06767G, Communication
Stefan Wuttke, Simone Braig, Tobias Prei[German sz ligature}, Andreas Zimpel, Johannes Sicklinger, Claudia Bellomo, Joachim O. Radler, Angelika M. Vollmar, Thomas Bein
We report the synthesis of MOF@lipid nanoparticles as a versatile and powerful novel class of nanocarriers based on metal-organic frameworks (MOFs).
The content of this RSS Feed (c) The Royal Society of Chemistry
09 Sep 17:51

Biosynthesis of the Novel Macrolide Antibiotic Anthracimycin

by Silke Alt and Barrie Wilkinson

TOC Graphic

ACS Chemical Biology
DOI: 10.1021/acschembio.5b00525
09 Sep 17:50

Two of a KindThe Biosynthetic Pathways of Chlorotonil and Anthracimycin

by Katrin Jungmann, Rolf Jansen, Klaus Gerth, Volker Huch, Daniel Krug, William Fenical and Rolf Müller

TOC Graphic

ACS Chemical Biology
DOI: 10.1021/acschembio.5b00523
04 Sep 18:49

Metabolic labeling puts the microbiome under the microscope

by Graham J Britton

Nature Medicine 21, 977 (2015). doi:10.1038/nm.3941

Authors: Graham J Britton & Jeremiah J Faith

Seven years after the launch of the Human Microbiome Project, we still lack sufficient tools to visualize the microbiome in a living host. A new study provides experimental tools to label and track live anaerobic bacteria in the microbial communities in the mouse gut and beyond.

25 Aug 19:17

A Rationally Designed Upconversion Nanoprobe for in Vivo Detection of Hydroxyl Radical

by Zhen Li, Tao Liang, Songwei Lv, Qinggeng Zhuang and Zhihong Liu

TOC Graphic

Journal of the American Chemical Society
DOI: 10.1021/jacs.5b06972
25 Aug 19:12

Bacteria, inflammation and cancer

by Jeffrey Pollard

Nature Reviews Immunology 15, 528 (2015). doi:10.1038/nri3899

Author: Jeffrey Pollard

Jeffrey Pollard describes a 2003 study by Enzler et al. that identified the immune response against bacteria as preventing chronic inflammation-associated tumour development.

18 Aug 13:17

Virtual Screening for UDP-Galactopyranose Mutase Ligands Identifies a New Class of Antimycobacterial Agents

by Virginia A. Kincaid, Nir London, Kittikhun Wangkanont, Darryl A. Wesener, Sarah A. Marcus, Annie Héroux, Lyudmila Nedyalkova, Adel M. Talaat, Katrina T. Forest, Brian K. Shoichet and Laura L. Kiessling

TOC Graphic

ACS Chemical Biology
DOI: 10.1021/acschembio.5b00370
18 Aug 13:13

Live-Cell Labeling of Specific Protein Glycoforms by Proximity-Enhanced Bioorthogonal Ligation

by Peter V. Robinson, Gabriela de Almeida-Escobedo, Amber E. de Groot, Julia L. McKechnie and Carolyn R. Bertozzi

TOC Graphic

Journal of the American Chemical Society
DOI: 10.1021/jacs.5b04279
17 Aug 13:34

Ligand-Modified Human Serum Albumin Nanoparticles for Enhanced Gene Delivery

by Jennifer Look, Nadine Wilhelm, Hagen von Briesen, Nadja Noske, Christine Günther, Klaus Langer and Erwin Gorjup

TOC Graphic

Molecular Pharmaceutics
DOI: 10.1021/acs.molpharmaceut.5b00153