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22 Sep 16:44

Accounting for Complementarity to Maximize Monitoring Power for Species Management

by AYESHA I. T. TULLOCH, IADINE CHADÈS, HUGH P. POSSINGHAM

Abstract

To choose among conservation actions that may benefit many species, managers need to monitor the consequences of those actions. Decisions about which species to monitor from a suite of different species being managed are hindered by natural variability in populations and uncertainty in several factors: the ability of the monitoring to detect a change, the likelihood of the management action being successful for a species, and how representative species are of one another. However, the literature provides little guidance about how to account for these uncertainties when deciding which species to monitor to determine whether the management actions are delivering outcomes. We devised an approach that applies decision science and selects the best complementary suite of species to monitor to meet specific conservation objectives. We created an index for indicator selection that accounts for the likelihood of successfully detecting a real trend due to a management action and whether that signal provides information about other species. We illustrated the benefit of our approach by analyzing a monitoring program for invasive predator management aimed at recovering 14 native Australian mammals of conservation concern. Our method selected the species that provided more monitoring power at lower cost relative to the current strategy and traditional approaches that consider only a subset of the important considerations. Our benefit function accounted for natural variability in species growth rates, uncertainty in the responses of species to the prescribed action, and how well species represent others. Monitoring programs that ignore uncertainty, likelihood of detecting change, and complementarity between species will be more costly and less efficient and may waste funding that could otherwise be used for management.

Contabilización de la Complementariedad para Maximizar el Poder de Monitoreo para el Manejo de Especies

Resumen

Para seleccionar entre acciones de conservación que puedan beneficiar a muchas especies, los administradores necesitan monitorear las consecuencias de estas acciones. Las decisiones sobre que especies monitorear de un conjunto de diferentes especies que se están manejando son impedidas por la variabilidad natural en las poblaciones y la incertidumbre de ciertos factores: la habilidad del monitoreo para detectar un cambio, la probabilidad de que la acción de manejo sea benéfica para una especie, y que tan representativas son las especies una con la otra. Sin embargo la bibliografía proporciona poca dirección sobre cómo responder a estas incertidumbres cuando se decide que especies monitorear para determinar si las acciones de manejo entregan resultados. Diseñamos una aproximación que aplica la ciencia de las decisiones y selecciona el mejor juego complementario de especies para monitorear para cumplir con objetivos específicos de conservación. Creamos un índice para la selección de indicadores que responde a la probabilidad de detectar exitosamente una tendencia verdadera debido a la acción de manejo y si esa señal proporciona información sobre otra especie. Ilustramos el beneficio de nuestra aproximación al analizar un programa de monitoreo para el manejo de depredadores invasivos enfocado a la recuperación de 14 especies de mamíferos australianos nativos y de interés para la conservación. Nuestro método seleccionó a las especies que proporcionan mayor poder de monitoreo a costos relativamente bajos para la estrategia actual y a las aproximaciones que utilizan sólo una parte de las consideraciones importantes. Nuestra función de beneficio valió para la variabilidad natural en las tasas de crecimiento de especies, la incertidumbre en la respuesta de las especies a la acción prescrita y que tan bien las especies representan a otras. Programas de monitoreo que ignoran incertidumbres, la probabilidad de detectar cambios y la complementariedad entre especies serán más costosos y menos eficientes y pueden gastar recursos que podrían usarse para manejo.

22 Sep 16:43

Methods for Indigenous Land-Use and Occupancy Mapping

by AMANDA H. LYNCH
22 Sep 16:43

Reassessment of the Use of Fire as a Management Tool in Deciduous Forests of Eastern North America

by GLENN R. MATLACK

Abstract

Prescribed burning is increasingly being used in the deciduous forests of eastern North America. Recent work suggests that historical fire frequency has been overestimated east of the prairie–woodland transition zone, and its introduction could potentially reduce forest herb and shrub diversity. Fire-history recreations derived from sedimentary charcoal, tree fire scars, and estimates of Native American burning suggest point-return times ranging from 5–10 years to centuries and millennia. Actual return times were probably longer because such records suffer from selective sampling, small sample sizes, and a probable publication bias toward frequent fire. Archeological evidence shows the environmental effect of fire could be severe in the immediate neighborhood of a Native American village. Population density appears to have been low through most of the Holocene, however, and villages were strongly clustered at a regional scale. Thus, it appears that the majority of forests of the eastern United States were little affected by burning before European settlement. Use of prescribed burning assumes that most forest species are tolerant of fire and that burning will have only a minimal effect on diversity. However, common adaptations such as serotiny, epicormic sprouting, resprouting from rhizomes, and smoke-cued germination are unknown across most of the deciduous region. Experimental studies of burning show vegetation responses similar to other forms of disturbance that remove stems and litter and do not necessarily imply adaptation to fire. The general lack of adaptation could potentially cause a reduction in diversity if burning were introduced. These observations suggest a need for a fine-grained examination of fire history with systematic sampling in which all subregions, landscape positions, and community types are represented. Responses to burning need to be examined in noncommercial and nonwoody species in rigorous manipulative experiments. Until such information is available, it seems prudent to limit the use of prescribed burning east of the prairie–woodland transition zone.

Reevaluación del Uso de Fuego como Herramienta de Manejo en Bosques Deciduos de América del Norte

Resumen

La quema planeada cada vez se usa más en el bosque deciduo del este de Norteamérica. Sin embargo, trabajos recientes sugieren que la frecuencia histórica de los fuegos se ha sobrestimado al este de la zona de transición entre la pradera y el bosque, y su introducción podría reducir la diversidad de hierbas y arbustos del bosque. Recreaciones históricas del fuego derivadas de carbón sedimentario, cicatrices de fuego en los árboles y estimaciones de quemas por los nativos americanos, sugieren tiempos de regreso al punto que van desde 5–10 años hasta siglos y milenios. Los tiempos de retorno actuales probablemente fueron más largos porque tales registros sufren de muestreo selectivo, tamaño pequeño de las muestras y un sesgo probable de publicación hacia el fuego frecuente. Evidencias arqueológicas muestran que los efectos ambientales del fuego pueden ser severos en la vecindad inmediata de una aldea nativa americana. Sin embargo parece que la densidad de población fue baja a lo largo de casi todo el Holoceno y las aldeas estuvieron agrupadas en una escala regional. Por esto, parece que la mayoría de los bosques del este de los Estados Unidos estuvo poco afectada por las quemas antes del establecimiento europeo. El uso de quemas planeadas asume que la mayoría de las especies del bosque son tolerantes al fuego y que la quema tendrá un efecto mínimo sobre la diversidad. Sin embargo, adaptaciones comunes como la serotinia, los brotes epicórmicos, el rebrote de rizomas y la germinación iniciada por humo no existen en casi toda la región decidua. Los estudios experimentales de la quema muestran respuestas de la vegetación que consisten en la remoción de tallos y basura: éstas son similares a las respuestas a otras formas de perturbación y no implican necesariamente la adaptación al fuego. La carencia general de adaptación puede causar una reducción en la diversidad si se introduce la quema. Estas observaciones sugieren la necesidad de una revisión cuidadosa de quemas históricas con muestreos sistemáticos en los que estén representadas todas las subregiones, posiciones de paisaje y tipos de comunidad. Las respuestas a la quema necesitan ser revisadas en especies no comerciales y no leñosas en experimentos con manipulación rigurosa. Hasta que tal información esté disponible, parece prudente limitar el uso de quemas planeadas al este de la zona de transición entre pradera y bosque.

22 Sep 16:43

How does ecological disturbance influence genetic diversity?

Sam C. Banks, Geoffrey J. Cary, Annabel L. Smith, Ian D. Davies, Don A. Driscoll, A. Malcolm Gill, David B. Lindenmayer, Rod Peakall.
• Environmental disturbance regimes are changing globally.
• Disturbance is an important driver of the distribution of genetic diversity.
• Disturbance influences....
22 Sep 16:42

Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation

by onlinepublishing@allenpress.com (Stéphane Dray et al)
Ecology, Volume 95, Issue 1, Page 14-21, January 2014.
Assessing trait responses to environmental gradients requires the simultaneous analysis of the information contained in three tables: L (species distribution across samples), R (environmental characteristics of samples), and Q (species traits). Among the available methods, the so-called fourth-corner and RLQ methods are two appealing alternatives that provide a direct way to test and estimate trait–environment relationships. Both methods are based on the analysis of the fourth-corner matrix, which crosses traits and environmental variables weighted by species abundances. However, they differ greatly in their outputs: RLQ is a multivariate technique that provides ordination scores to summarize the joint structure among the three tables, whereas the fourth-corner method mainly tests for individual trait–environment relationships (i.e., one trait and one environmental variable at a time). Here, we illustrate how the complementarity between these two methods can be exploited to promote new ecological knowledge and to improve the study of trait–environment relationships. After a short description of each method, we apply them to real ecological data to present their different outputs and provide hints about the gain resulting from their combined use.
22 Sep 16:42

Aboveground and belowground legacies of native Sami land use on boreal forest in northern Sweden 100 years after abandonment

by onlinepublishing@allenpress.com (Grégoire T. Freschet et al)
Ecology, Volume 95, Issue 4, Page 963-977, April 2014.
Human activities that involve land-use change often cause major transformations to community and ecosystem properties both aboveground and belowground, and when land use is abandoned, these modifications can persist for extended periods. However, the mechanisms responsible for rapid recovery vs. long-term maintenance of ecosystem changes following abandonment remain poorly understood. Here, we examined the long-term ecological effects of two remote former settlements, regularly visited for ∼300 years by reindeer-herding Sami and abandoned ∼100 years ago, within an old-growth boreal forest that is considered one of the most pristine regions in northern Scandinavia. These human legacies were assessed through measurements of abiotic and biotic soil properties and vegetation characteristics at the settlement sites and at varying distances from them. Low-intensity land use by Sami is characterized by the transfer of organic matter towards the settlements by humans and reindeer herds, compaction of soil through trampling, disappearance of understory vegetation, and selective cutting of pine trees for fuel and construction. As a consequence, we found a shift towards early successional plant species and a threefold increase in soil microbial activity and nutrient availability close to the settlements relative to away from them. These changes in soil fertility and vegetation contributed to 83% greater total vegetation productivity, 35% greater plant biomass, and 23% and 16% greater concentrations of foliar N and P nearer the settlements, leading to a greater quantity and quality of litter inputs. Because decomposer activity was also 40% greater towards the settlements, soil organic matter cycling and nutrient availability were further increased, leading to likely positive feedbacks between the aboveground and belowground components resulting from historic land use. Although not all of the activities typical of Sami have left visible residual traces on the ecosystem after 100 years, their low-intensity but long-term land use at settlement sites has triggered a rejuvenation of the ecosystem that is still present. Our data demonstrates that aboveground–belowground interactions strongly control ecosystem responses to historical human land use and that medium- to long-term consequences of even low-intensity human activities must be better accounted for if we are to predict and manage ecosystems succession following land-use abandonment.
22 Sep 16:42

Challenges of ecological restoration: Lessons from forests in northern Europe

Publication date: November 2013
Source:Biological Conservation, Volume 167
Author(s): Panu Halme , Katherine A. Allen , Ainārs Auniņš , Richard H.W. Bradshaw , Guntis Brūmelis , Vojtěch Čada , Jennifer L. Clear , Anna-Maria Eriksson , Gina Hannon , Esko Hyvärinen , Sandra Ikauniece , Reda Iršėnaitė , Bengt Gunnar Jonsson , Kaisa Junninen , Santtu Kareksela , Atte Komonen , Janne S. Kotiaho , Jari Kouki , Timo Kuuluvainen , Adriano Mazziotta , Mikko Mönkkönen , Kristiina Nyholm , Anna Oldén , Ekaterina Shorohova , Niels Strange , Tero Toivanen , Ilkka Vanha-Majamaa , Tuomo Wallenius , Anna-Liisa Ylisirniö , Ewa Zin
The alarming rate of ecosystem degradation has raised the need for ecological restoration throughout different biomes and continents. North European forests may appear as one of the least vulnerable ecosystems from a global perspective, since forest cover is not rapidly decreasing and many ecosystem services remain at high level. However, extensive areas of northern forests are heavily exploited and have lost a major part of their biodiversity value. There is a strong requirement to restore these areas towards a more natural condition in order to meet the targets of the Convention on Biological Diversity. Several northern countries are now taking up this challenge by restoring forest biodiversity with increasing intensity. The ecology and biodiversity of boreal forests are relatively well understood making them a good model for restoration activities in many other forest ecosystems. Here we introduce northern forests as an ecosystem, discuss the historical and recent human impact and provide a brief status report on the ecological restoration projects and research already conducted there. Based on this discussion, we argue that before any restoration actions commence, the ecology of the target ecosystem should be established with the need for restoration carefully assessed and the outcome properly monitored. Finally, we identify the most important challenges that need to be solved in order to carry out efficient restoration with powerful and long-term positive impacts on biodiversity: coping with unpredictability, maintaining connectivity in time and space, assessment of functionality, management of conflicting interests and social restrictions and ensuring adequate funding.

22 Sep 16:42

Comparing field-based monitoring and remote-sensing, using deforestation from logging at Important Bird Areas as a case study

Publication date: November 2013
Source:Biological Conservation, Volume 167
Author(s): Graeme M. Buchanan , Lincoln D.C. Fishpool , Michael I. Evans , Stuart H.M. Butchart
Monitoring sites of biodiversity conservation importance is essential for their conservation. It allows threats to be identified and quantified, priorities to be set, responses to be developed, and facilitates adaptive management. Field-based monitoring protocols need to be simple enough to be widely applied in countries with limited capacity while being sufficiently robust to provide widely reliable data. A simple, globally standardised monitoring protocol is now being implemented at thousands of sites of global avian conservation significance (Important Bird Areas, IBAs) worldwide, but the consistency of the approach across sites, countries and regions remains untested. We tested the match between estimates of the threat to IBAs from logging derived from such monitoring, with standardised deforestation rates derived from remote sensing data for 2000–2005 to determine if the two were consistently related. We found a significant positive correlation between the impact of the threat from logging and the proportion of forest lost (although the gross forest loss did not differ systematically with the two components of the threat impact: scope and severity). The results give us some confidence that the simple field-based protocol being implemented by a diversity of surveyors with varied technical capacity can generate meaningful and consistent monitoring data across the globe.

22 Sep 16:42

Modelling individual and collective species responses to climate change within Small Island States

Publication date: November 2013
Source:Biological Conservation, Volume 167
Author(s): Shobha S. Maharaj , Mark New
Very little empirical work has been done to assess the potential impacts of climate change upon terrestrial biodiversity within small islands, many of which contribute to global species diversity due to high levels of endemicity. This study illustrates projections of not only individual but also the ‘collective’ response of a group of high conservation value tree species to climate change within the Caribbean small island of Trinidad. The species distribution modelling algorithm MaxEnt was used to construct models of the realised present environmental space occupied by these species based on present day climate and other environmental factors. These models were then used to estimate present and future (2050; SRES A2) distributions of these species across Trinidad. Both present and future model output were incorporated to create change maps which illustrate projected expansions, contractions and areas of stable environmental space for each species. Individual change maps were combined to create a ‘collective’ change map portraying projected changes in the environmental space of this species group as a whole. Most individual species and the collective group response were projected to lose more than 50% of present environmental space, with the latter being limited to the southern edge of the island. Our results suggest that small islands may experience an eventual disappearance of endemics and other valuable species under SRES A2 conditions, which may serve to further depreciate global terrestrial species diversity. Application of this ‘collective’ response may be particularly useful for planning within the limited geographic spaces available for conservation within small islands.

19 Sep 18:09

REVIEW: Identifying links between vital rates and environment: a toolbox for the applied ecologist

by Morten Frederiksen, Jean-Dominique Lebreton, Roger Pradel, Rémi Choquet, Olivier Gimenez

Summary

  1. In a rapidly changing world, understanding and predicting population change is a central aim of applied ecologists, and this involves studying the links between environmental variation and vital rates (survival, fecundity, etc.). Demographic analysis and modelling can be daunting for practicing ecologists, and here we provide an overview of some of the most important issues and methods.
  2. Collection of demographic data should follow standardized protocols and the statistical power to detect links with environment is critically dependent on long time-series. Candidate environmental covariates should be carefully selected with a view to reducing the risk of spurious correlations. The relevant sample size for environment–demography links is typically the number of years and mixed models with random year effects offer a powerful framework to enforce this.
  3. Data on individually marked animals are the best source of information on demography. These data can be analysed and demographic parameters estimated using a wide variety of capture–mark–recapture models, available in standard software packages.
  4. Population models integrate all demographic variables and provide estimates of population growth rate. Two common classes of models are matrix models and integrated population models, where the latter combine parameter estimation and dynamic modelling.
  5. Synthesis and applications. Careful demographic analysis and modelling has provided solutions for many real-world problems in population management, as well as assisting the development of general principles. The tools currently available are flexible and powerful, and the main limitations to their more general use are data availability and training.
19 Sep 18:09

Modelling the distribution of the European wild rabbit in fragmented environments

by Lluís Brotons

image

Ecoland members have investigated the factor affecting the occurrence of European wild rabbit in fragmented environments in a mountainous area of northwestern Spain (Gerês-Xurés Biosphere Reserve). The study has been led by Luis Tapia and conducted in collaboration with Jesús Domínguez and Maria Vidal from University of Santiago de Compostela. 

Field survey was carried out by sampling the presence/absence of pellets in 237 plots (100 x 100 m) selected at random below an altitude of 800 m. For modeling purposes, we considered eight predictors related to vegetation, topography, human influence and heterogeneity. All predictors were obtained from Landsat-derived maps by using a Neuronal Artificial Neural Networks algorithm, and a Global Digital Elevation Model (GDEM). Generalized linear model were used to describe the occurrence of the European wild rabbit.

The information on habitat requirements of European wild rabbit in the area provides a good framework for determining the habitat requirements of this keystone species in mountainous ecosystems in northwestern Iberian Peninsula and confirms that digital data-based models can solve many of the problems associated with field data in wildlife modelling.

TAPIA, L; DOMÍNGUEZ, J.; REGOS, A. and VIDAL, M. (2013). Using remote sensing data to model European wild rabbit (Oryctolagus cuniculus) occurrence in a highly fragmented landscape in northwestern Spain. Acta Theriologica, doi: 10.1007/s13364-013-0169-2.

19 Sep 18:09

Distance decay of similarity, effects of environmental noise and ecological heterogeneity among species in the spatio-temporal dynamics of a dispersal-limited community

by Edwige Bellier, Vidar Grøtan, Steinar Engen, Ann Kristin Schartau, Ivar Herfindal, Anders G. Finstad

The joint spatial and temporal fluctuations in community structure may be due to dispersal, variation in environmental conditions, ecological heterogeneity among species and demographic stochasticity. These factors are not mutually exclusive, and their relative contribution towards shaping species abundance distributions and in causing species fluctuations have been hard to disentangle. To better understand community dynamics when the exchange of individuals between localities is very low, we studied the dynamics of the freshwater zooplankton communities in 17 lakes located in independent catchment areas, sampled at end of summer from 2002 to 2008 in Norway. We analysed the joint spatial and temporal fluctuations in the community structure by fitting the two-dimensional Poisson lognormal model under a two-stage sampling scheme. We partitioned the variance of the distribution of log abundance for a random species at a random time and location into components of demographic stochasticity, ecological heterogeneity among species, and independent environmental noise components for the different species. Non-neutral mechanisms such as ecological heterogeneity among species (20%) and spatiotemporal variation in the environment (75%) explained the majority of the variance in log abundances. Overdispersion relative to Poisson sampling and demographic stochasticity had a small contribution to the variance (5%). Among a set of environmental variables, lake acidity was the environmental variable that was most strongly related to decay of community similarity in space and time.

19 Sep 18:08

Designing mosaic landscapes for Black Grouse Tetrao tetrix using multi-scaled models

by Matthew Geary, Alan H. Fielding, Stuart J. Marsden

With increasing pressures on land for human use, it is important to identify the habitat requirements of key species, not just in terms of a correlation with a given habitat feature, but also the relationship between species presence and its coverage, proximity to other habitat types, and importance at different spatial scales. We used maximum entropy to estimate the optimal proportions of 18 habitat types, plus elevation and habitat richness associated with the presence of leks of Black Grouse Tetrao tetrix within an 800-km2 study area in Perthshire, Scotland. We repeated the analysis at several radii (0.2–3 km) to assess how the importance of different habitats changed with proximity to lek and scale. We then examined habitat features or combinations of features that were associated with large leks or positive lek growth. Models at all radii had satisfactory predictive power. Using response curves from maxent, we constructed ideal habitat mixes for leks at each radius. At the 2-km radius, suitability was highest with around 20% each of three moorland types and open/mixed forestry, whereas close to leks (0.2 km), higher proportions of grouse moor and lower proportions of closed-canopy woodland were optimal. The relationship between habitat and lek size or direction of lek growth was complex, indicating that a landscape containing large or productive leks can be the result of more than one combination of habitats. This demonstrates a degree of flexibility in designing landscapes for Black Grouse conservation, so landowners can prioritize combinations of habitats that are the most practical and/or economical, while still serving the requirements of the target species.

19 Sep 18:08

An evaluation of the robustness of global amphibian range maps

by Gentile Francesco Ficetola, Carlo Rondinini, Anna Bonardi, Vineet Katariya, Emilio Padoa-Schioppa, Ariadne Angulo

Abstract

Aim

Maps of species ranges are among the most frequently used distribution data in biodiversity studies. As with any biological data, range maps have some level of measurement error, but this error is rarely quantified. We assessed the error associated with amphibian range maps by comparing them with point locality data.

Location

Global.

Methods

The maps published by the Global Amphibian Assessment were assessed against two data sets of species point localities: the Global Biodiversity Information Facility (GBIF), and a refined data set including recently published, high-quality presence data from both GBIF and other sources. Range fit was measured as the proportion of presence records falling within the range polygon(s) for each species.

Results

Using the high-quality point data provided better fit measures than using the raw GBIF data. Range fit was highly variable among continents, being highest for North American and European species (a fit of 84–94%), and lowest for Asian and South American species (a fit of 57–64%). At the global scale, 95% of amphibian point records were inside the ranges published in maps, or within 31 km of the range edge. However, differences among continents were striking, and more points were found far from range edges for South American and Asian species.

Main conclusions

The Global Amphibian Assessment range maps represent the known distribution of most amphibians well; this study provides measures of accuracy that can be useful for future research using amphibian maps as baseline data. Nevertheless, there is a need for greater investment in the continuous updating and improvement of maps, particularly in the megadiverse areas of tropical Asia and South America.

19 Sep 18:08

When and where does mortality occur in migratory birds? Direct evidence from long-term satellite tracking of raptors

by Raymond H. G. Klaassen, Mikael Hake, Roine Strandberg, Ben J. Koks, Christiane Trierweiler, Klaus-Michael Exo, Franz Bairlein, Thomas Alerstam

Summary

  1. Information about when and where animals die is important to understand population regulation. In migratory animals, mortality might occur not only during the stationary periods (e.g. breeding and wintering) but also during the migration seasons. However, the relative importance of population limiting factors during different periods of the year remains poorly understood, and previous studies mainly relied on indirect evidence.
  2. Here, we provide direct evidence about when and where migrants die by identifying cases of confirmed and probable deaths in three species of long-distance migratory raptors tracked by satellite telemetry.
  3. We show that mortality rate was about six times higher during migration seasons than during stationary periods. However, total mortality was surprisingly similar between periods, which can be explained by the fact that risky migration periods are shorter than safer stationary periods. Nevertheless, more than half of the annual mortality occurred during migration. We also found spatiotemporal patterns in mortality: spring mortality occurred mainly in Africa in association with the crossing of the Sahara desert, while most mortality during autumn took place in Europe.
  4. Our results strongly suggest that events during the migration seasons have an important impact on the population dynamics of long-distance migrants. We speculate that mortality during spring migration may account for short-term annual variation in survival and population sizes, while mortality during autumn migration may be more important for long-term population regulation (through density-dependent effects).
Thumbnail image of graphical abstract

The authors use satellite telemetry to describe when and where migratory raptors die during the annual cycle. Daily mortality is six times higher during migration than during stationary periods (breeding and wintering), but total mortality is surprisingly equal between seasons, as ‘dangerous’ migration periods are shorter than ‘safe’ stationary periods.

19 Sep 18:07

Birds exploit herbivore-induced plant volatiles to locate herbivorous prey

by Luisa Amo, Jeroen J. Jansen, Nicole M. Dam, Marcel Dicke, Marcel E. Visser

Abstract

Arthropod herbivory induces plant volatiles that can be used by natural enemies of the herbivores to find their prey. This has been studied mainly for arthropods that prey upon or parasitise herbivorous arthropods but rarely for insectivorous birds, one of the main groups of predators of herbivorous insects such as lepidopteran larvae. Here, we show that great tits (Parus major) discriminate between caterpillar-infested and uninfested trees. Birds were attracted to infested trees, even when they could not see the larvae or their feeding damage. We furthermore show that infested and uninfested trees differ in volatile emissions and visual characteristics. Finally, we show, for the first time, that birds smell which tree is infested with their prey based on differences in volatile profiles emitted by infested and uninfested trees. Volatiles emitted by plants in response to herbivory by lepidopteran larvae thus not only attract predatory insects but also vertebrate predators.

19 Sep 18:07

Drought footprint on European ecosystems between 1999 and 2010 assessed by remotely sensed vegetation phenology and productivity

by E Ivits, S Horion, R Fensholt, M Cherlet

Abstract

Drought affects more people than any other natural disaster but there is little understanding of how ecosystems react to droughts. This study jointly analyzed spatio-temporal changes of drought patterns with vegetation phenology and productivity changes between 1999 and 2010 in major European bioclimatic zones. The Standardized Precipitation and Evapotranspiration Index (SPEI) was used as drought indicator whereas changes in growing season length and vegetation productivity were assessed using remote sensing time-series of Normalized Difference Vegetation Index (NDVI). Drought spatio-temporal variability was analyzed using a Principal Component Analysis, leading to the identification of four major drought events between 1999 and 2010 in Europe. Correspondence Analysis showed that at the continental scale the productivity and phenology reacted differently to the identified drought events depending on ecosystem and land cover. Northern and Mediterranean ecosystems proved to be more resilient to droughts in terms of vegetation phenology and productivity developments. Western Atlantic regions and Eastern Europe showed strong agglomerations of decreased productivity and shorter vegetation growing season length, indicating that these ecosystems did not buffer the effects of drought well. In a climate change perspective, increase in drought frequency or intensity may result in larger impacts over these ecosystems, thus management and adaptation strategies should be strengthened in these areas of concerns.

19 Sep 18:07

Environmental Complexity Promotes Biodiversity

Sep. 17, 2013 - A new study published in the journal American Naturalist helps explain how spatial variation in natural environments helps spur evolution and give rise to biodiversity.
19 Sep 18:06

Individual personalities predict social behaviour in wild networks of great tits (Parus major)

by L. M. Aplin, D. R. Farine, J. Morand-Ferron, E. F. Cole, A. Cockburn, B. C. Sheldon

Abstract

Social environments have an important effect on a range of ecological processes, and form a crucial component of selection. However, little is known of the link between personality, social behaviour and population structure. We combine a well-understood personality trait with large-scale social networks in wild songbirds, and show that personality underpins multiple aspects of social organisation. First, we demonstrate a relationship between network centrality and personality with ‘proactive’ (fast-exploring) individuals associating weakly with greater numbers of conspecifics and moving between flocks. Second, temporal stability of associations relates to personality: ‘reactive’ (slow-exploring) birds form synergistically stable relationships. Finally, we show that personality influences social structure, with males non-randomly distributed across groups. These results provide strong evidence that songbirds follow alternative social strategies related to personality. This has implications not only for the causes of social network structure but also for the strength and direction of selection on personality in natural populations.

19 Sep 18:05

Dissimilarity measurements and the size structure of ecological communities

by Miquel Cáceres, Pierre Legendre, Fangliang He

Summary

  1. Measurements of community resemblance in ecology are often based on species composition, and the starting point for calculations is usually a site-by-species data table. However, resemblance measurements may not be sufficiently accurate when communities are described using species composition only. Characteristics such as the size of their constituting organisms are also important to understand community organization.
  2. Here, we provide a framework that generalizes conventional resemblance measurements by incorporating the size structure of the compared communities. We first introduce the concept of cumulative abundance profile, which generalizes traditional species abundance values, and describe how to calculate it. We then explain our approach to compare cumulative abundance profiles in community resemblance measurements and use a small simulation study to determine which resemblance coefficients appropriately deal with compositional and structural differences. After that, we present an illustrative example where we study the structural and compositional variation between and within six Douglas-fir forest plots in British Columbia, Canada.
  3. According to our investigations, the generalizations we suggest for the percentage difference (alias Bray–Curtis dissimilarity) and the Ružička coefficients are appropriate to measure community resemblance in terms of size structure, species composition or both.
  4. Our framework allows community resemblance to be measured in terms of either size structure or species composition, or both. A broad range of applications is expected. In the case of terrestrial plant communities, potential applications include analyses of community dynamics and classification of vegetation.
17 Sep 06:48

Report from the Conceptual Framework Workshop now available

by rohan.shanbhag@unep.org (consultant)

International Expert Workshop on the Conceptual Framework Workshop for IPBES took place 25 - 26 August 2013, in Cape Town, South Africa, convened by the IPBES Multidisciplinary Expert Panel (MEP) and co-hosted by the Governments of South Africa, the United Kingdom and with additional support from the Government of Japan. The report is now available from here.

15 Sep 14:55

Spatial occupancy models applied to atlas data show Southern Ground Hornbills strongly depend on protected areas

by onlinepublishing@allenpress.com (Kristin Mai Broms et al)
Ecological Applications, Volume 24, Issue 2, Page 363-374, March 2014.
Determining the range of a species and exploring species–habitat associations are central questions in ecology and can be answered by analyzing presence–absence data. Often, both the sampling of sites and the desired area of inference involve neighboring sites; thus, positive spatial autocorrelation between these sites is expected. Using survey data for the Southern Ground Hornbill (Bucorvus leadbeateri) from the Southern African Bird Atlas Project, we compared advantages and disadvantages of three increasingly complex models for species occupancy: an occupancy model that accounted for nondetection but assumed all sites were independent, and two spatial occupancy models that accounted for both nondetection and spatial autocorrelation. We modeled the spatial autocorrelation with an intrinsic conditional autoregressive (ICAR) model and with a restricted spatial regression (RSR) model. Both spatial models can readily be applied to any other gridded, presence–absence data set using a newly introduced R package. The RSR model provided the best inference and was able to capture small-scale variation that the other models did not. It showed that ground hornbills are strongly dependent on protected areas in the north of their South African range, but less so further south. The ICAR models did not capture any spatial autocorrelation in the data, and they took an order of magnitude longer than the RSR models to run. Thus, the RSR occupancy model appears to be an attractive choice for modeling occurrences at large spatial domains, while accounting for imperfect detection and spatial autocorrelation.
15 Sep 14:52

Assessing migratory connectivity for a long-distance migratory bird using multiple intrinsic markers

by onlinepublishing@allenpress.com (Clark Sawyer Rushing et al)
Ecological Applications, Volume 24, Issue 3, Page 445-456, April 2014.
Patterns of migratory connectivity are a vital yet poorly understood component of the ecology and evolution of migratory birds. Our ability to accurately characterize patterns of migratory connectivity is often limited by the spatial resolution of the data, but recent advances in probabilistic assignment approaches have begun pairing stable isotopes with other sources of data (e.g., genetic and mark–recapture) to improve the accuracy and precision of inferences based on a single marker. Here, we combine stable isotopes and geographic variation in morphology (wing length) to probabilistically assign Wood Thrush (Hylocichla mustilena) captured on the wintering grounds to breeding locations. In addition, we use known-origin samples to validate our model and assess potentially important impacts of isotopic and morphological covariates (age, sex, and breeding location). Our results show that despite relatively high levels of mixing across their breeding and nonbreeding ranges, moderate levels of migratory connectivity exist along an east–west gradient. In addition, combining stable isotopes with geographic variation in wing length improved the precision of breeding assignments by 10% and 37% compared to assignments based on isotopes alone or wing length alone, respectively. These results demonstrate that geographical variation in morphological traits can greatly improve estimates of migratory connectivity when combined with other intrinsic markers (e.g., stable isotopes or genetic data). The wealth of morphological data available from museum specimens across the world represents a tremendously valuable, but largely untapped, resource that is widely applicable for quantifying patterns of migratory connectivity.
15 Sep 14:52

IPBES-2 Registration for Governments - Extended

by rohan.shanbhag@unep.org (consultant)

Please note that the registration deadline for Governments to attend the second session of the IPBES plenary (IPBES-2) has been extended to Monday, 30 September.

For government delegations that have yet to complete the online registration, kindly do so now from here.

10 Sep 22:58

Recommendations of the Bureau on the admission of new Observers to IPBES-2

by rohan.shanbhag@unep.org (consultant)

The IPBES Bureau has reviewed applications for admission of new Observers to IPBES-2.

The list is available here.

Any member of the Platform may communicate its view on the recommendations of the Bureau by 25 November 2013 by sending an email to secretariat@ipbes.net

10 Sep 22:58

Provisional Agenda for IPBES-2 available

by rohan.shanbhag@unep.org (consultant)

The Provisional Agenda for IPBES-2 is available here.

10 Sep 22:58

Video on Stakeholders in IPBES

by rohan.shanbhag@unep.org (consultant)

Watch the video produced by the German Science-policy platform on biodiversity (NeFO) at the pan-european stakeholder consultation hosted by UFZ, held in Leipzig, Germany on 16 -18 July.

10 Sep 22:57

Confronting expert-based and modelled distributions for species with uncertain conservation status: A case study from the corncrake (Crex crex)

Publication date: November 2013
Source:Biological Conservation, Volume 167
Author(s): Yoan Fourcade , Jan O. Engler , Aurélien G. Besnard , Dennis Rödder , Jean Secondi
The Red List classification of IUCN has become one of the most important evaluations of threats that affect biodiversity at the species level. However, many estimations of species range, one essential factor in the Red List classification, are derived from expert-based assessments that sometimes lack empirical evidence. Our study focused on the corncrake (Crex crex), a grassland Palaearctic bird whose conservation status has been revised recently following some new assessments of range and population size. However, the amount of data that form the basis of this reclassification appears weak compared to the large area involved. We used a method of species distribution modelling (MAXENT) to predict the corncrake range and confronted it to the expert-based map. We resolved the huge geographic bias in the distribution of presence points by using a relevant method of sampling bias correction. We found a rather similar distribution with the IUCN estimated range, although less widespread. We also highlighted a relationship between habitat suitability computed by the model and population estimates per country when the effect of agriculture intensity is taken into account. This result supports the current expert-based estimates of corncrake distribution and emphasizes that a relevant modelling strategy should be able to predict the distribution of a species even from a biased dataset. IUCN estimates of species’ ranges would certainly benefit from a model-based approach in addition to expert and field controls.

Graphical abstract

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10 Sep 22:57

Previous Fires Moderate Burn Severity of Subsequent Wildland Fires in Two Large Western US Wilderness Areas

Abstract

Wildland fire is an important natural process in many ecosystems. However, fire exclusion has reduced frequency of fire and area burned in many dry forest types, which may affect vegetation structure and composition, and potential fire behavior. In forests of the western U.S., these effects pose a challenge for fire and land managers who seek to restore the ecological process of fire to ecosystems. Recent research suggests that landscapes with unaltered fire regimes are more “self-regulating” than those that have experienced fire-regime shifts; in self-regulating systems, fire size and severity are moderated by the effect of previous fire. To determine if burn severity is moderated in areas that recently burned, we analyzed 117 wildland fires in 2 wilderness areas in the western U.S. that have experienced substantial recent fire activity. Burn severity was measured using a Landsat satellite-based metric at a 30-m resolution. We evaluated (1) whether pixels that burned at least twice since 1984 experienced lower burn severity than pixels that burned once, (2) the relationship between burn severity and fire history, pre-fire vegetation, and topography, and (3) how the moderating effect of a previous fire decays with time. Results show burn severity is significantly lower in areas that have recently burned compared to areas that have not. This effect is still evident at around 22 years between wildland fire events. Results further indicate that burn severity generally increases with time since and severity of previous wildfire. These findings may assist land managers to anticipate the consequences of allowing fires to burn and provide rationale for using wildfire as a “fuel treatment”.

10 Sep 22:57

Exclusion of deer affects responses of birds to woodland regeneration in winter and summer

by Chas A. Holt, Robert J. Fuller, Paul M. Dolman

Using an exclosure experiment in managed woodland in eastern England, we examined species and guild responses to vegetation growth and its modification by deer herbivory, contrasting winter and the breeding season over 4 years. Species and guild responses, in terms of seasonal presence recorded by multiple point counts, were examined using generalized linear mixed models. Several guilds or migrant species responded positively to deer exclusion and none responded negatively. The shrub-layer foraging guild was recorded less frequently in older and browsed vegetation, in both winter and spring. Exclusion of deer also increased the occurrence of ground-foraging species in both seasons, although these species showed no strong response to vegetation age. The canopy-foraging guild was unaffected by deer exclusion or vegetation age in either season. There was seasonal variation in the responses of some individual resident species, including a significantly lower occurrence of Eurasian Wren Troglodytes troglodytes and European Robin Erithacus rubecula in browsed vegetation in winter, but no effect of browsing on those species in spring. Ordinations of bird assemblage compositions also revealed seasonal differences in response to gradients of vegetation structure generated by canopy-closure and exclusion of deer. Positive impacts of deer exclusion in winter are probably linked to reduced thermal cover and predator protection afforded by browsed vegetation, whereas species that responded positively in spring were also dependent on a dense understorey for nesting. The effects on birds of vegetation development and its modification by herbivores extend beyond breeding assemblages, with different mechanisms implicated and different species affected in winter.