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10 Oct 21:04

The Modern Face of Synthetic Heterocyclic Chemistry

by Chiara Cabrele and Oliver Reiser

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The Journal of Organic Chemistry
DOI: 10.1021/acs.joc.6b02034
08 Oct 11:40

Access to Acyclic Z-Enediynes by Alkyne Trimerization: Cooperative Bimetallic Catalysis Using Air as the Oxidant

Access to Acyclic Z‐Enediynes by Alkyne Trimerization: Cooperative Bimetallic Catalysis Using Air as the Oxidant

Mix and go: Presented herein is a mild, operationally simple, mix-and-go procedure for the synthesis of acyclic trisubstituted Z-enediynes from readily available terminal alkynes in good yields. This method stems from a serendipitous discovery, and makes use of cooperative palladium/copper bimetallic catalysis and air as an oxidant to effect an intriguing alkyne trimerization to yield the valuable Z-enediyne moiety.

[Communication]
Jin Tu Danence Lee, Yu Zhao
Angew. Chem. Int. Ed., October 07, 2016, DOI: 10.1002/anie.201608192. Read article

28 Sep 07:30

A Stable Crystalline Triarylphosphine Oxide Radical Anion

A Stable Crystalline Triarylphosphine Oxide Radical Anion

The spin within: A carefully designed triarylphosphine oxide scaffold with sterically demanding spirofluorenyl moieties undergoes chemical one-electron reduction at its phosphoryl moiety. The unique stability of the formed radical anion enables the isolation and X-ray crystallographic characterization of this hitherto elusive species.

[Communication]
Tobias A. Schaub, Eva M. Zolnhofer, Dominik P. Halter, Tatyana E. Shubina, Frank Hampel, Karsten Meyer, Milan Kivala
Angew. Chem. Int. Ed., September 27, 2016, DOI: 10.1002/anie.201605963. Read article

27 Sep 18:20

Electron Delocalization in Perylene Diimide Helicenes

Electron Delocalization in Perylene Diimide Helicenes

Two helicenes were synthesized by double fusion of an acene with two perylene diimide (PDI) subunits. These PDI-helicene homologs show different structural and electronic properties, despite differing by only a single ring in the link between the PDI units. The shorter link brings the two PDI subunits closer together, and this results in the collision of their respective π-electron clouds.

[Communication]
Nathaniel J. Schuster, Daniel W. Paley, Steffen Jockusch, Fay Ng, Michael L. Steigerwald, Colin Nuckolls
Angew. Chem. Int. Ed., September 26, 2016, DOI: 10.1002/anie.201607878. Read article

25 Sep 20:45

Nonplanar Butterfly-Shaped π-Expanded Pyrrolopyrroles

by Maciej Krzeszewski, Takuya Kodama, Eli M. Espinoza, Valentine I. Vullev, Takashi Kubo, Daniel T. Gryko

Abstract

Large aza-analogues of curved polycyclic aromatic hydrocarbons with a double-helicene structure present unique features for molecular photonics. We present the preparation and characterization of three such structures. The synthesis of these heterocyclic nanographenes involves only a few high-yield steps that use readily available starting materials. X-ray analysis revealed that each of these new dyes has three conformational isomers: one diastereoisomer in a meso form and two enantiomers in twisted forms [(P,P)] and [(M,M)]. The low energy barriers between the conformers, however, prevent their separation by using chiral HPLC, and the NMR spectra show only one set of signals for each of these curved compounds. Density functional theory (DFT) calculations quantify the small energy difference and the small energy barriers between the chiral and meso forms, which fully supports the experimental results. Their optical absorption lacks any sensitivity to the solvent environment, whereas their fluorescence features exhibit pronounced solvatochromism. This rarely observed solvatofluorochromism of centrosymmetric molecules without either electron-withdrawing groups or -donating substituents was probed by using time-resolved spectroscopy. These studies suggest that, similar to 9,9′-bianthryl, the nonpolar locally excited state shows negligible solvatochromism, whereas the charge-transfer state is sensitive to solvent polarity.

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Let′s twist again! In two steps, simple pyrrolo[3,2-b]pyrroles can be transformed into double helical polycyclic aromatic heteroaromatics with low energy barriers between the conformational isomers and fluorescence solvatochromism (see figure). The existence of folded and twisted isomers was unequivocally confirmed by using X-ray crystallography.

25 Sep 20:44

Three Short Stories about Hexaarylbenzene–Porphyrin Scaffolds

by Dominik Lungerich, Jakob Hitzenberger, Wolfgang Donaubauer, Thomas Drewello, Norbert Jux

Abstract

A feasible two-step synthesis and characterization of a full series of hexaarylbenzene (HAB) substituted porphyrins and tetrabenzoporphyrins is presented. Key steps represent the microwave-assisted porphyrin condensation and the statistical Diels–Alder reaction to the desired HAB-porphyrins. Regarding their applications, they proved to be easily accessible and effective high molecular mass calibrants for (MA)LDI mass spectrometry. The free-base and zinc(II) porphyrin systems, as well as the respective tetrabenzoporphyrins, demonstrate in solid state experiments strong red- and near-infrared-light emission and are potentially interesting for the application in “truly organic” light-emitting devices. Lastly, they represent facile precursors to large polycyclic aromatic hydrocarbon (PAH) substituted porphyrins. We prepared the first tetra-hexa-peri-hexabenzocoronene substituted porphyrin, which represents the largest prepared PAH-porphyrin conjugate to date.

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Hexaarylbenzene (HAB)-substituted (tetrabenzo)porphyrins were found to have useful properties for various applications, such as calibrants for (MA)LDI instruments, as strong red- and near- infrared light emitters, and as precursors to large superbenzene-porphyrin light-harvesting architectures.

23 Sep 12:38

Circularly Polarized Luminescence from Axially Chiral BODIPY DYEmers: An Experimental and Computational Study

by Francesco Zinna, Torsten Bruhn, Ciro A. Guido, Johannes Ahrens, Martin Bröring, Lorenzo Di Bari, Gennaro Pescitelli

Abstract

With our new home-built circularly polarized luminescence (CPL) instrument, we measured fluorescence and CPL spectra of the enantiomeric pairs of two quasi-isomeric BODIPY DYEmers 1 and 2, endowed with axial chirality. The electronic circular dichroism (ECD) and CPL spectra of these atropisomeric dimers are dominated by the exciton coupling between the main π–π* transitions (550–560 nm) of the two BODIPY rings. Compound 1 has strong ECD and CPL spectra (glum=4×10−3) well reproduced by TD-DFT and SCS-CC2 (spin-component scaled second-order approximate coupled-cluster) calculations using DFT-optimized ground- and excited-state structures. Compound 2 has weaker ECD and CPL spectra (glum=4×10−4), partly due to the mutual cancellation of electric–electric and electric–magnetic exciton couplings, and partly to its conformational freedom. This compound is computationally very challenging. Starting from the optimized excited-state geometries, we predicted the wrong sign for the CPL band of 2 using TD-DFT with the most recommended hybrid and range-separated functionals, whereas SCS-CC2 or a DFT functional with full exact exchange provided the correct sign.

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Chiral light excitement: Fluorescence and circularly polarized luminescence (CPL) spectra of BODIPY DYEmers 1 and 2 were measured with a new home-built CPL instrument (see figure). Compound 1 has strong electronic circular dichroism (ECD) and CPL spectra (glum=4×10−3) well reproduced by M06-2X and SCS-CC2 calculations. Compound 2 has weaker ECD and CPL spectra (glum=4×10−4), due to the mutual cancellation of μμ and mμ exciton couplings, and to its conformational freedom. The correct CPL sign could be obtained only with SCS-CC2 or M06-HF calculations.

23 Sep 07:19

Carbaporphyrinoid Systems

by Timothy D. Lash

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Chemical Reviews
DOI: 10.1021/acs.chemrev.6b00326
16 Sep 15:49

Orthogonal Bodipy Trimers as Photosensitizers for Photodynamic Action

by Tugba Ozdemir, Jose Luis Bila, Fazli Sozmen, Leyla T. Yildirim and Engin U. Akkaya

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Organic Letters
DOI: 10.1021/acs.orglett.6b02418
16 Sep 15:48

Construction of the carbon-chalcogen (S, Se, Te) bond at the 2,6-positions of BODIPY via Stille cross-coupling reaction

Chem. Commun., 2016, 52,11951-11954
DOI: 10.1039/C6CC06923A, Communication
E. Palao, T. Slanina, P. Klan
Novel 2-chalcogen- or 2,6-dichalcogen-BODIPY derivatives were synthesized by a Pd-catalyzed C-heteroatom Stille cross-coupling reaction, overcoming the limitations of SNAr.
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14 Sep 08:21

General and Scalable Approach to A2B- and A2BC-Type Porphyrin Phosphonate Diesters

by Yulia Yu. Enakieva, Julien Michalak, Inna A. Abdulaeva, Marina V. Volostnykh, Christine Stern, Roger Guilard, Alla G. Bessmertnykh-Lemeune, Yulia G. Gorbunova, Aslan Yu. Tsivadze, Karl M. Kadish

A two-step reaction sequence for accessing meso-(dialkoxyphosphoryl)porphyrins from readily available trans-A2-type porphyrins was developed. This approach involves bromination and subsequent palladium-catalyzed phosphonylation. Optimal conditions for both steps were identified after exploration of various reaction parameters such as solvent, temperature and catalyst. A series of dialkoxyphosphoryl-substituted A2B-porphyrins Zn3(ag) bearing electron-donating, electron-withdrawing or sterically bulky substituents at the meso-aryl groups were prepared in overall yields close to 40 %. These compounds, being air-stable and soluble in most organic solvents, are valuable synthetic intermediates because they can be readily transformed into functionalized trans-A2BC-type porphyrins through regioselective functionalization at the unsubstituted meso position of the macrocycle. Therefore, this approach offers considerable promise for application to the synthesis of trans-A2BC-type porphyrins, including water-soluble derivatives, push-pull chromophores and bis(porphyrin)s.

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A two-step reaction sequence for the preparation of A2B-type porphyrin phosphonate diesters from readily available A2-type porphyrins was developed. These compounds are valuable synthetic intermediates because they can be readily transformed into functionalized A2BC-type porphyrin phosphonate diesters through selective functionalization at the unsubstituted meso position.

30 Aug 16:45

Fusing tetrapyrroles to graphene edges by surface-assisted covalent coupling

by Yuanqin He

Nature Chemistry. doi:10.1038/nchem.2600

Authors: Yuanqin He, Manuela Garnica, Felix Bischoff, Jacob Ducke, Marie-Laure Bocquet, Matthias Batzill, Willi Auwärter & Johannes V. Barth

Lateral anchoring of heteromolecules to graphene paves the way for the creation of hybrid materials with tunable properties. Now, following a surface-assisted dehydrogenative coupling reaction, the edges of graphene on silver have been functionalized with porphines. This enables the assembly of well-defined multifunctional graphene-based nanostructures.

26 Aug 08:09

Employing Arynes in Diels–Alder Reactions and Transition-Metal-Free Multicomponent Coupling and Arylation Reactions

by Sachin Suresh Bhojgude, Anup Bhunia and Akkattu T. Biju

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Accounts of Chemical Research
DOI: 10.1021/acs.accounts.6b00188
25 Aug 16:07

Naphthalene-fused BODIPY near-infrared dye as a stable contrast agent for in vivo photoacoustic imaging

Chem. Commun., 2016, 52,11504-11507
DOI: 10.1039/C6CC05126J, Communication
Yong Ni, Ravi K. Kannadorai, Juanjuan Peng, Sidney W.-K. Yu, Young-Tae Chang, Jishan Wu
Naphthalene-fused BODIPY near infrared dye (Na-BD) was synthesized and used as a stable contrast agent for in vivo photoacoustic imaging.
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25 Aug 16:04

The role of counter-anions in the kinetics and chirality of porphyrin J-aggregates

Chem. Commun., 2016, 52,11520-11523
DOI: 10.1039/C6CC05768C, Communication
I. G. Occhiuto, R. Zagami, M. Trapani, L. Bolzonello, A. Romeo, M. A. Castriciano, E. Collini, L. Monsu Scolaro
The structure-making or breaking abilities of different anions, according to the Hofmeister series, play an important role in controlling the kinetics of growth and the chirality in porphyrin J-aggregates.
The content of this RSS Feed (c) The Royal Society of Chemistry
24 Aug 07:37

Nucleophilic Aromatic Substitution on Pentafluorophenyl-Substituted Dipyrranes and Tetrapyrroles as a Route to Multifunctionalized Chromophores for Potential Application in Photodynamic Therapy

by Claudia S. Gutsche, Marlene Ortwerth, Susanna Gräfe, Keith J. Flanagan, Mathias O. Senge, Hans-Ulrich Reissig, Nora Kulak, Arno Wiehe

Abstract

The application of porphyrinoids in biomedical fields, such as photodynamic therapy (PDT), requires the introduction of functional groups to tune their solubility for the biological environment and to allow a coupling to other active moieties or carrier systems. A valuable motif in this regard is the pentafluorophenyl (PFP) substituent, which can easily undergo a regiospecific nucleophilic replacement (SNAr) of its para-fluorine atom by a number of nucleophiles. Here, it is shown that, instead of amino-substitution on the final porphyrinoid or BODIPY (boron dipyrromethene), the precursor 5-(PFP)-dipyrrane can be modified with amines (or alcohols). These dipyrranes were transformed into amino-substituted BODIPYs. Condensation of these dipyrranes with aldehydes gave access to trans-A2B2-porphyrins and trans-A2B-corroles. By using pentafluorobenzaldehyde, it was possible to introduce another para-fluorine atom, which enabled the synthesis of multifunctionalized tetrapyrroles. Furthermore, alkoxy- and amino-substituted dipyrranes were applied to the synthesis of A3B3-hexaphyrins. The polar porphyrins that were prepared by using this method exhibited in vitro PDT activity against several tumor cell lines.

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Agents of change: An alternative approach to amino-substitution of porphyrinoid or BODIPY compounds is achieved by modification of the PFP-dipyrrane precursor with a range of different amines or alcohols. These dipyrranes are transformed to specifically substituted corroles, porphyrins, hexaphyrins, and BODIPYs. Selected porphyrins are tested for their photodynamic therapy activity.

19 Aug 07:55

The Prowess of Photogenerated Amine Radical Cations in Cascade Reactions: From Carbocycles to Heterocycles

by Scott A. Morris, Jiang Wang and Nan Zheng

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Accounts of Chemical Research
DOI: 10.1021/acs.accounts.6b00263
19 Aug 07:51

DNA naturally fluoresces: Discovery opens door for staining-free, super-resolution imaging

Scientist shave recently caught DNA doing something that has never been seen before: it blinked.
08 Aug 16:03

Hexaarylbenzene: Evolution of Properties and Applications of Multitalented Scaffold

by Varun Vij, Vandana Bhalla and Manoj Kumar

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Chemical Reviews
DOI: 10.1021/acs.chemrev.6b00144
08 Aug 16:02

Synthetic Chlorins, Possible Surrogates for Chlorophylls, Prepared by Derivatization of Porphyrins

by Masahiko Taniguchi and Jonathan S. Lindsey

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Chemical Reviews
DOI: 10.1021/acs.chemrev.5b00696
05 Aug 14:38

Mechanism-Based Design and Optimization of a Catalytic Electrophilic Cyclopropanation without Diazomethane

by Augustin A. S. W. Tchawou, Mihai Raducan and Peter Chen

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Organometallics
DOI: 10.1021/acs.organomet.6b00531
02 Aug 11:16

Poly(ethylene oxide) Functionalized Graphene Nanoribbons with Excellent Solution Processability

by Yinjuan Huang, Yiyong Mai, Uliana Beser, Joan Teyssandier, Gangamallaiah Velpula, Hans van Gorp, Lasse Arnt Straasø, Michael Ryan Hansen, Daniele Rizzo, Cinzia Casiraghi, Rong Yang, Guangyu Zhang, Dongqing Wu, Fan Zhang, Deyue Yan, Steven De Feyter, Klaus Müllen and Xinliang Feng

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Journal of the American Chemical Society
DOI: 10.1021/jacs.6b07061
29 Jul 14:56

High Performance Fe Porphyrin/Ionic Liquid Co-catalyst for Electrochemical CO2 Reduction

by Jaecheol Choi, Tania M Benedetti, Rouhollah Jalili, Ashley Walker, Gordon G. Wallace, David L. Officer

Abstract

The efficient and selective catalytic reduction of CO2 is a highly promising process for both of the storage of renewable energy as well as the production of valuable chemical feedstocks. In this work, we show that the addition of an ionic liquid, 1-butyl-3-methylimidazolium tetrafluoroborate, in an aprotic electrolyte containing a proton source and FeTPP, promotes the in situ formation of the [Fe0TPP]2− homogeneous catalyst at a less negative potential, resulting in lower overpotentials for the CO2 reduction (670 mV) and increased kinetics of electron transfer. This co-catalysis exhibits high Faradaic efficiency for CO production (93 %) and turnover number (2 740 000 after 4 hour electrolysis), with a four-fold increase in turnover frequency (TOF) when compared with the standard system without the ionic liquid.

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The potential of attraction: The presence of an imidazolium ionic liquid has a significant effect on the Fe porphyrin-catalyzed reduction of CO2 to CO in the presence of a proton source. The ionic liquid cation interacts with the reduced porphyrin leading to a significantly lowered overpotential and substantially higher catalytic activity in the reduction of CO2.

27 Jul 07:56

Highly Emissive Far Red/Near-IR Fluorophores Based on Borylated Fluorene–Benzothiadiazole Donor–Acceptor Materials

by Daniel L. Crossley, Inigo Vitorica-Yrezabal, Martin J. Humphries, Michael L. Turner, Michael J. Ingleson

Abstract

Stille, Suzuki–Miyaura and Negishi cross-coupling reactions of bromine-functionalised borylated precursors enable the facile, high yielding, synthesis of borylated donor–acceptor materials that contain electron-rich aromatic units and/or extended effective conjugation lengths. These materials have large Stokes shifts, low LUMO energies, small band-gaps and significant fluorescence emission >700 nm in solution and when dispersed in a host polymer.

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The perfect couple: Cross-coupling enables the high yielding synthesis of borylated donor–acceptor materials that contain electron-rich aromatics units and/or extended effective conjugation lengths. These materials have large Stokes shifts, low LUMO energies, small band-gaps and significant fluorescence emission >700 nm in solution and in the solid state.

24 Jul 15:40

Ultrasensitive sensor using N-doped graphene

A highly sensitive chemical sensor based on Raman spectroscopy and using nitrogen-doped graphene as a substrate was developed by an international team of researchers. In this case, doping refers to introducing nitrogen atoms into the carbon structure of graphene. This technique can detect trace amounts of molecules in a solution at very low concentrations, some 10,000 times more diluted than can be seen by the naked eye.
19 Jul 19:34

Hydro-aza-(C59N)fullerenes: Formation Mechanism and Hydrogen Substitution

by Regina Eigler, Frank W. Heinemann, Andreas Hirsch

Abstract

Azafullerenes are as yet the only synthetically available heterofullerenes. Herein, we present plausible reaction pathways towards pentaaryl azafullerenes, focusing on the reactivity of hydro-azafullerene intermediates and their regiochemistry. The X-ray structure of a β′-hydro-tetraaryl adduct is presented for the first time. The reactivity of dihydro-azafullerene adducts is demonstrated here through H-abstraction in mass spectrometric experiments. Moreover, hydride abstraction and subsequent hydroxylation is possible, as well as deprotonation followed by alkylation.

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Regioselectivity in hydro-azafullerene reactions: The reactivity of hydro-azafullerene intermediates en route to pentaaryl derivatives has been explored. Experimental results have shown that both hydride and proton abstraction occur preferentially at the α′-positions of dihydro-azafullerenes.

19 Jul 10:27

Conversion of Dinitrogen to Ammonia by FeN3-Embedded Graphene

by Xiao-Fei Li, Qin-Kun Li, Jin Cheng, Lingling Liu, Qing Yan, Yingchao Wu, Xiang-Hua Zhang, Zhi-Yong Wang, Qi Qiu and Yi Luo

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Journal of the American Chemical Society
DOI: 10.1021/jacs.6b04778
19 Jul 10:26

Bottom-Up Synthesis of Soluble and Narrow Graphene Nanoribbons Using Alkyne Benzannulations

by Wenlong Yang, Andrea Lucotti, Matteo Tommasini and Wesley A. Chalifoux

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Journal of the American Chemical Society
DOI: 10.1021/jacs.6b03014
14 Jul 09:11

1,3-Dien-5-ynes: Versatile Building Blocks for the Synthesis of Carbo- and Heterocycles

by Enrique Aguilar, Roberto Sanz, Manuel A. Fernández-Rodríguez and Patricia García-García

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Chemical Reviews
DOI: 10.1021/acs.chemrev.6b00181
30 Jun 20:12

The Dynamic Covalent Chemistry of Esters, Acetals and Orthoesters

by René-Chris Brachvogel, Max von Delius

Dynamic covalent chemistry (DCC) is a vibrant research area that has extended its reach from supramolecular chemistry into fields as diverse as bioconjugation, materials science and systems chemistry. Because DCC crucially rests on reversible organic reactions, considerable effort has been invested in the development of new reactions of this type and the identification of new methods for facilitating existing processes. Our group has recently reported that orthoester exchange is a previously overlooked reversible reaction that is in principle suited for many applications of DCC. This microreview gives an overview on our ongoing work on orthoester exchange, and puts it into the context of previous studies on the related dynamic covalent chemistry of esters and acetals.

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This microreview discusses the fundamental aspects of three related reversible covalent reactions and their uses in dynamic combinatorial libraries and the self-assembly of stimuli-responsive molecules and materials.