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23 Feb 14:57

Highly Potent Cell-Permeable and Impermeable NanoLuc Luciferase Inhibitors

by Joel R. Walker, Mary P. Hall, Chad A. Zimprich, Matthew B. Robers, Sarah J. Duellman, Thomas Machleidt, Jacquelynn Rodriguez and Wenhui Zhou

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ACS Chemical Biology
DOI: 10.1021/acschembio.6b01129
17 Feb 19:46

Versatile Platform for the Synthesis of Orthogonally Cleavable Heteromultifunctional Cross-Linkers

by Michelle R. Sorkin, Joshua A. Walker, Joseph S. Brown and Christopher A. Alabi

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Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.7b00033
15 Feb 21:10

Pinning a bull’s-eye on cancer cells

by Stu Borman
Bioorthogonal technique adds azide groups to cancer cell surfaces for selective drug targeting
15 Feb 21:07

Broad Wins CRISPR Patent Interference Case

The USPTO’s Patent Trial and Appeal Board has ruled in favor of the Broad Institute of MIT and Harvard retaining intellectual property rights covered by its patents for CRISPR gene-editing...
08 Feb 20:04

Toward Killing Cancer with Bacteria

Researchers employ an engineered microbe to destroy tumor cells in mice.
06 Feb 20:06

Peptide-Based Stealth Nanoparticles for Targeted and pH-Triggered Delivery

by Alessandro Ranalli, Melissa Santi, Luigi Capriotti, Valerio Voliani, David Porciani, Fabio Beltram and Giovanni Signore

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Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.6b00701
06 Feb 20:06

A potent synthetic inorganic antibiotic with activity against drug-resistant pathogens

by Shelby Hubick

A potent synthetic inorganic antibiotic with activity against drug-resistant pathogens

Scientific Reports, Published online: 6 February 2017; doi:10.1038/srep41999

25 Jan 20:59

Big science has a buzzword problem

by Megan Scudellari

Big science has a buzzword problem

Nature 541, 7638 (2017). http://www.nature.com/doifinder/10.1038/541450a

Author: Megan Scudellari

Moonshots, road maps, frameworks and more are proliferating, but few can agree on what these names even mean.

23 Jan 14:42

Lipids Take the Lead in Metastasis

Researchers find diverse ways that the molecules can regulate cancer’s spread.
19 Jan 15:14

Five big mysteries about CRISPR’s origins

by Heidi Ledford

Five big mysteries about CRISPR’s origins

Nature 541, 7637 (2017). http://www.nature.com/doifinder/10.1038/541280a

Author: Heidi Ledford

Where did it come from? How do organisms use it without self-destructing? And what else can it do?

18 Jan 18:12

Replication Complications

An initiative to replicate key findings in cancer biology yields a preliminary conclusion: it’s difficult.
17 Jan 16:12

Next Generation: Mobile Microscope Detects DNA Sequences

A cell phone–based microscope can identify mutations in tumor tissue and image products of DNA sequencing reactions.
17 Jan 15:56

Glycan Alteration Imparts Cellular Resistance to a Membrane-Lytic Anticancer Peptide.

by Ishikawa K, Medina SH, Schneider JP, Klar AJ
Related Articles

Glycan Alteration Imparts Cellular Resistance to a Membrane-Lytic Anticancer Peptide.

Cell Chem Biol. 2017 Feb 16;24(2):149-158

Authors: Ishikawa K, Medina SH, Schneider JP, Klar AJ

Abstract
Although resistance toward small-molecule chemotherapeutics has been well studied, the potential of tumor cells to avoid destruction by membrane-lytic compounds remains unexplored. Anticancer peptides (ACPs) are a class of such agents that disrupt tumor cell membranes through rapid and non-stereospecific mechanisms, encouraging the perception that cellular resistance toward ACPs is unlikely to occur. We demonstrate that eukaryotic cells can, indeed, develop resistance to the model oncolytic peptide SVS-1, which preferentially disrupts the membranes of cancer cells. Utilizing fission yeast as a model organism, we show that ACP resistance is largely controlled through the loss of cell-surface anionic saccharides. A similar mechanism was discovered in mammalian cancer cells where removal of negatively charged sialic acid residues directly transformed SVS-1-sensitive cell lines into resistant phenotypes. These results demonstrate that changes in cell-surface glycosylation play a major role in tumor cell resistance toward oncolytic peptides.

PMID: 28089756 [PubMed - indexed for MEDLINE]

17 Jan 15:01

Nanoparticles deprive tumors of their oxygen

by Michael Torrice
Magnesium silicide particles can react with oxygen in acidic tumor environments
17 Jan 15:00

A Novel Platinum(II)-Based Bifunctional ADC Linker Benchmarked Using 89Zr-Desferal and Auristatin F-Conȷugated Trastuzumab

by Niels J. Sijbrandi, Eugen Merkul, Joey A. Muns, Dennis C.J. Waalboer, Kevin Adamzek, Marije Bolijn, Veronica Montserrat, Govert W. Somsen, Rob Haselberg, Paul J.G.M. Steverink, Hendrik-Jan Houthoff, Guus A.M.S. van Dongen
Greater control is desirable in the stochastic conjugation technology used to synthesize antibody–drug conjugates (ADC). We have shown recently that a fluorescent dye can be stably conjugated to a mAb using a bifunctional platinum(II) linker. Here, we describe the general applicability of this novel linker technology for the preparation of stable and efficacious ADCs. The ethylenediamine platinum(II) moiety, herein called Lx, was coordinated to Desferal (DFO) or auristatin F (AF) to provide storable “semifinal” products, which were directly conjugated to unmodified mAbs. Conjugation resulted in ADCs with unimpaired mAb-binding characteristics, DAR in the range of 2.5 to 2.7 and approximately 85% payload bound to the Fc region, presumably to histidine residues. To evaluate the in vivo stability of Lx and its effect on pharmacokinetics and tumor targeting of an ADC, Lx-DFO was conjugated to the HER2 mAb trastuzumab, followed by radiolabeling with 89Zr. Trastuzumab-Lx-DFO-89Zr was stable in vivo and exhibited pharmacokinetic and tumor-targeting properties similar to parental trastuzumab. In a xenograft mouse model of gastric cancer (NCI-N87) or an ado-trastuzumab emtansine-resistant breast cancer (JIMT-1), a single dose of trastuzumab-Lx-AF outperformed its maleimide benchmark trastuzumab-Mal-AF and FDA-approved ado-trastuzumab emtansine. Overall, our findings show the potential of the Lx technology as a robust conjugation platform for the preparation of anticancer ADCs. Cancer Res; 77(2); 257–67. ©2016 AACR.
13 Jan 19:30

Strategies for the Activation and Release of the Membranolytic Peptide Melittin from Liposomes Using Endosomal pH as a Trigger

by E. Oude Blenke, M. Sleszynska, M. J. W. Evers, G. Storm, N. I. Martin and E. Mastrobattista

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Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.6b00677
13 Jan 17:18

Log D versus HPLC derived hydrophobicity: The development of predictive tools to aid in the rational design of bioactive peptoids

by H.L. Bolt, C.E.J Williams, R.V. Brooks, R.N. Zuckermann, S. L. Cobb, E.H.C Bromley

Abstract

Hydrophobicity has proven to be an extremely useful parameter in small molecule drug discovery programmes given that it can be used as a predictive tool to enable rational design. For larger molecules, including peptoids, where folding is possible, the situation is more complicated and the average hydrophobicity (as determined by RP-HPLC retention time) may not always provide an effective predictive tool for rational design. Herein, we report the first ever application of partitioning experiments to determine the log D values for a series of peptoids. By comparing log D and average hydrophobicities we highlight the potential advantage of employing the former as a predictive tool in the rational design of biologically active peptoids.

13 Jan 17:08

Researchers solve a cancer conundrum

by Sarah Everts
As cells turn cancerous, ribosome regulators force the cellular machines to preferentially produce cancer proteins
13 Jan 14:22

Site-Specific and Stoichiometric Stealth Polymer Conjugates of Therapeutic Peptides and Proteins

by Imran Ozer and Ashutosh Chilkoti

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Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.6b00652
12 Jan 14:59

Exploring the Epigenetics of Ethnicity

Researchers attempt to estimate how much of the human genome’s methylation patterns can be attributed to genetic ancestry.
09 Jan 14:01

Investigation of Hydrophilic Auristatin Derivatives for Use in Antibody Drug Conjugates

by Brian A. Mendelsohn, Stuart D. Barnscher, Josh T. Snyder, Zili An, Jennifer M. Dodd and Julien Dugal-Tessier

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Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.6b00530
06 Jan 13:45

pH-Triggered, Macromolecule-Sized Poration of Lipid Bilayers by Synthetically Evolved Peptides

by Gregory Wiedman, Sarah Y. Kim, Elmer Zapata-Mercado, William C. Wimley and Kalina Hristova

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Journal of the American Chemical Society
DOI: 10.1021/jacs.6b11447
04 Jan 15:19

Therapeutic Efficacy of a Family of pHLIP-MMAF Conjugates in Cancer Cells & Mouse Models.

by Burns KE, Hensley H, Robinson MK, Thévenin D
Related Articles

Therapeutic Efficacy of a Family of pHLIP-MMAF Conjugates in Cancer Cells & Mouse Models.

Mol Pharm. 2017 Jan 03;:

Authors: Burns KE, Hensley H, Robinson MK, Thévenin D

Abstract
The targeting of therapeutics specifically to diseased tissue is crucial for the development of successful cancer treatments. The approach here is based on the pH(Low) Insertion Peptide (pHLIP) for the delivery of a potent mitotic inhibitor monomethyl auristatin F (MMAF). We investigated, six pHLIP variants conjugated to MMAF to compare their efficacy in vitro against cultured cancer cells. While all pHLIP-MMAF conjugates exhibit potent pH- and concentration-dependent killing, their cytotoxicity profiles are remarkably different. We also show that the lead conjugate exhibits significant therapeutic efficacy in mouse models without overt toxicities. This study confirms pHLIP-monomethyl auristatin conjugates as possible new therapeutic options for cancer treatment and supports their further development.

PMID: 28048942 [PubMed - as supplied by publisher]

03 Jan 13:56

Enhancing the Cell Permeability and Metabolic Stability of Peptidyl Drugs by Reversible Bicyclization

by Ziqing Qian, Curran A. Rhodes, Lucas C. McCroskey, Jin Wen, George Appiah-Kubi, David J. Wang, Denis C. Guttridge, Dehua Pei

Abstract

Therapeutic applications of peptides are currently limited by their proteolytic instability and impermeability to the cell membrane. A general, reversible bicyclization strategy is now reported to increase both the proteolytic stability and cell permeability of peptidyl drugs. A peptide drug is fused with a short cell-penetrating motif and converted into a conformationally constrained bicyclic structure through the formation of a pair of disulfide bonds. The resulting bicyclic peptide has greatly enhanced proteolytic stability as well as cell-permeability. Once inside the cell, the disulfide bonds are reduced to produce a linear, biologically active peptide. This strategy was applied to generate a cell-permeable bicyclic peptidyl inhibitor against the NEMO-IKK interaction.

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In the loop: Peptide bicyclization by a pair of disulfide bonds increases its proteolytic stability and cell permeability. This method also allows for regeneration of the functional linear peptide once inside the cytosol of the cell. CPP=cell-penetrating peptide.

23 Dec 16:34

Speaking of Science: 2016

Selected quotes from an eventful year
22 Dec 19:37

Expanding CRISPR toolkit may render patent fight moot

by Ryan Cross
Newly discovered CasX and CasY enzymes could be a safety net for UC Berkeley in an ongoing patent dispute
20 Dec 20:38

In Vivo Detoxification of Lipopolysaccharide by Antimicrobial Peptides

by Wenxu Zhang, Jiangcheng He, Junchen Wu and Carsten Schmuck

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Bioconjugate Chemistry
DOI: 10.1021/acs.bioconjchem.6b00664
19 Dec 15:30

A two-punch attack from CRISPR knocks out HIV in cells

by Ryan Cross
The gene-editing technology mutates the virus’s DNA, blocking its replication in immune cells
16 Dec 16:52

[Editorial] Science's rightful place

by Jeremy Berg
In his first inaugural address, U.S. President Obama said, “We'll restore science to its rightful place…” He subsequently used this phrase to frame a number of activities across his administration.* While I, like many in the scientific community, was pleased with this declaration, I found the term “rightful place” to be thought-provoking. Author: Jeremy Berg
15 Dec 21:47

Opinion: Balancing Risks and Rewards of CAR T-Cell Therapy

New approaches to treating cancer have shown great promise, but they also come with serious risks that give us cause for concern.